Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841730.1_cds_XP_016508072.1_21131
CDS Infomation

[gene=LOC107825698] [db_xref=GeneID:107825698] [protein=T-complex protein 1 subunit beta] [protein_id=XP_016508072.1] [location=join(161404..161409,161502..161558,161947..162012,162106..162217,162625..162753,163554..163625,163848..163963,165246..165322,165987..166472,166956..167271,168070..168213)] [gbkey=CDS]
Sequence

ATGGCGATTGACAAAATCTTCAAAGATGAAGCCACTGAAGAAAAGGGCGAGCGCGCTAGG
ATGGCGTCGTTTATCGGAGCAATGGCAATTGCTGACTTGGTAAAGACAACCTTAGGACCT
AAGGGGATGGATAAAATTTTGCAATCGACAGGCAGAGGACACAGTGTTACAGTTACCAAT
GATGGTGCAACAATTTTGAAGTCCCTCCATATTGACAATCCAGCTGCCAAGGTCCTCGTG
GATATCTCCAAGGTACAGGATGATGAAGTTGGTGATGGGACAACTTCAGTAGTCGTTTTG
GCTGGAGAACTTTTGAGGGAGGCAGAAAAGCTGGTAAATTCAAAAATTCATCCGATGACA
ATTATTTCAGGTTTCCGGATGGCATCTGAGTGTGCACGCAATGTTCTGGAGCAGAAGGTC
GTGGATAACAAGCAGGATGCAGAGAAGTTTAGATCTGACTTAATGAATATTGCAAGGACT
ACTTTGAGCTCAAAAATCTTGTCTCAGGACAAGGAGCATTTTGCAAAACTGGCTGTTGAT
GCGGTTATGAGGTTAAAGGGCAGTACCAATCTTGAGGCAATCCAGATAATTAAGAAACCT
GGAGGTTCATTGAAGGATTCATTTTTAGATGAAGGGTTTATTTTGGACAAAAAGATTGGG
GTTGGCCAACCAAAACGCATTGAAAATGCTAAGATTTTGGTGGCAAATACTGCTATGGAT
ACAGATAAAGTGAAGATATATGGAGCACGTGTTCGAGTTGACTCAATGACCAAGGTTGCT
GATCTAGAAGCAGCTGAAAAGGAAAAAATGAGAGAGAAGGTGCAAAAGATCATTAGTCAT
GGAATAAATTGCTTTGTTAACCGACAGCTTATCTACAATTTCCCGGAGGAACTATTTGCT
GATGCAGGGATACTTGCAATAGAGCATGCTGATTTTGATGGTATTGAACGGTTGGGTTTA
GTTACTGGTGGAGAAATTGCCTCAACCTTTGATAATCCAGAGTCTGTTAAGCTTGGCCAC
TGCAAACTTATCGAGGAGATTATGATTGGTGAAGATAAGCTGATCCACTTCTCTGGGGTT
GAAATGGGCCAGGCATGTACAATCGTTTTGAGAGGTGCAAGCCCTCATGTACTGGATGAA
GCTGAAAGATCTCTGCACGATGCATTGTGCGTACTGTCTCAGACAGTAAATGACAGTAGG
GTTTTACTTGGAGGTGGATGGCCTGAGATGGTGATGGCTAAGGCGGTTGATGAACTAGCT
AAGAAGACTCCAGGTAAAAGATCTCATGCAATTGAGGCTTTTACCCGTGCACTTTTGGCA
ATTCCAACGACTATTGCCGACAATGCCGGATTAGATAGTGCGGAGTTGATTGCTCAGCTT
CGTGCGGAACACCACAAGGAGGAAAGCAATGCAGGAATTGATGTCATCTCTGGATCTGTT
GGAGATATGGCAGAGCTAGGAATATCTGAGTCGTTCAAAGTCAAACAGGCAGTGTTGCTC
TCTGCCACTGAGGCTGCTGAGATGATCCTAAGGGTTGACGAAATCATCACTTGTGCCCCA
CGGAGGAGGGAGGGAATGTAA

Peptide Sequence

PEP ID

XP_016508072.1
PEP Infomation

PREDICTED: T-complex protein 1 subunit beta [Nicotiana tabacum]
Sequence

MAIDKIFKDEATEEKGERARMASFIGAMAIADLVKTTLGPKGMDKILQSTGRGHSVTVTN
DGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNSKIHPMT
IISGFRMASECARNVLEQKVVDNKQDAEKFRSDLMNIARTTLSSKILSQDKEHFAKLAVD
AVMRLKGSTNLEAIQIIKKPGGSLKDSFLDEGFILDKKIGVGQPKRIENAKILVANTAMD
TDKVKIYGARVRVDSMTKVADLEAAEKEKMREKVQKIISHGINCFVNRQLIYNFPEELFA
DAGILAIEHADFDGIERLGLVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGV
EMGQACTIVLRGASPHVLDEAERSLHDALCVLSQTVNDSRVLLGGGWPEMVMAKAVDELA
KKTPGKRSHAIEAFTRALLAIPTTIADNAGLDSAELIAQLRAEHHKEESNAGIDVISGSV
GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRREGM

Transcript Sequence

Gene sequence data has not been registered.